Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 AL049757.1-201ENST00000616842 1596 ntBASIC13.75□□□□□ -0.21
RAB40CQ96S21 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 AC012306.2-201ENST00000609350 630 ntBASIC13.75□□□□□ -0.21
RAB40CQ96S21 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40CQ96S21 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40CQ96S21 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 AC140113.3-201ENST00000605663 199 ntBASIC13.74□□□□□ -0.21
RAB40CQ96S21 LINC01023-201ENST00000606054 436 ntBASIC13.74□□□□□ -0.21
RAB40CQ96S21 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB40CQ96S21 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB40CQ96S21 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB40CQ96S21 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms