Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
AP3S1Q92572 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP3S1Q92572 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP3S1Q92572 OR2I1P-210ENST00000642037 4691 ntBASIC14.93□□□□□ -0.02
AP3S1Q92572 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 AC092338.2-201ENST00000568827 1415 ntBASIC14.93□□□□□ -0.02
AP3S1Q92572 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 COX5BP2-201ENST00000392354 334 ntBASIC14.93□□□□□ -0.02
AP3S1Q92572 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.93□□□□□ -0.02
AP3S1Q92572 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
AP3S1Q92572 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.93□□□□□ -0.02
AP3S1Q92572 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.93□□□□□ -0.02
AP3S1Q92572 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP3S1Q92572 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
AP3S1Q92572 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
AP3S1Q92572 PCDHA3-202ENST00000532566 4594 ntBASIC14.92□□□□□ -0.02
AP3S1Q92572 FAM45BP-202ENST00000592932 1624 ntBASIC14.92□□□□□ -0.02
AP3S1Q92572 LINC02228-204ENST00000642115 2962 ntBASIC14.92□□□□□ -0.02
AP3S1Q92572 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.92□□□□□ -0.02
AP3S1Q92572 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.92□□□□□ -0.02
AP3S1Q92572 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
AP3S1Q92572 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
AP3S1Q92572 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.92□□□□□ -0.02
AP3S1Q92572 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP3S1Q92572 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms