Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 AC092329.2-201ENST00000598402 547 ntBASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 AC092119.3-201ENST00000612618 583 ntBASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 AC022188.1-201ENST00000620960 1664 ntBASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 NSUN5P1-202ENST00000421140 1535 ntBASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 NSUN5P2-203ENST00000457352 1529 ntBASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.27□□□□□ -0.12
RTN4IP1Q8WWV3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 UPK3BP1-201ENST00000428678 509 ntBASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AC104819.1-201ENST00000504587 486 ntBASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AP000867.3-201ENST00000524675 377 ntBASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 AC074051.2-201ENST00000565115 352 ntBASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.27□□□□□ -0.13
RTN4IP1Q8WWV3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC007950.2-201ENST00000615045 2347 ntBASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTN4IP1Q8WWV3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms