Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 KRT18P27-201ENST00000427733 1299 ntBASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 AC006538.3-201ENST00000612495 578 ntBASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MIR7706-201ENST00000613747 67 ntBASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 FAM215A-202ENST00000632077 792 ntBASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SIMC1Q8NDZ2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PCDHB17P-201ENST00000539533 2393 ntBASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 LAGE3P1-201ENST00000425356 484 ntBASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 AF186996.4-201ENST00000467186 377 ntBASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 DUX4L17-201ENST00000557360 1267 ntBASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 AC243591.1-201ENST00000452967 1364 ntBASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SIMC1Q8NDZ2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.96■□□□□ 0.14
SIMC1Q8NDZ2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.96■□□□□ 0.14
SIMC1Q8NDZ2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
SIMC1Q8NDZ2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SIMC1Q8NDZ2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SIMC1Q8NDZ2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AC092171.3-201ENST00000610122 2651 ntBASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SIMC1Q8NDZ2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms