Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 AL603756.1-201ENST00000606511 2163 ntBASIC17.47■□□□□ 0.39
SCML4Q8N228 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
SCML4Q8N228 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SCML4Q8N228 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.47■□□□□ 0.39
SCML4Q8N228 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.47■□□□□ 0.39
SCML4Q8N228 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 RARRES2P8-201ENST00000566335 367 ntBASIC17.47■□□□□ 0.39
SCML4Q8N228 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.47■□□□□ 0.39
SCML4Q8N228 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SCML4Q8N228 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SCML4Q8N228 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCML4Q8N228 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCML4Q8N228 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SCML4Q8N228 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SCML4Q8N228 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.46■□□□□ 0.39
SCML4Q8N228 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SCML4Q8N228 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCML4Q8N228 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 WASH6P-202ENST00000359512 1437 ntBASIC17.46■□□□□ 0.39
SCML4Q8N228 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.46■□□□□ 0.39
SCML4Q8N228 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SCML4Q8N228 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCML4Q8N228 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SCML4Q8N228 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
SCML4Q8N228 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCML4Q8N228 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SCML4Q8N228 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.45■□□□□ 0.38
SCML4Q8N228 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCML4Q8N228 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCML4Q8N228 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.45■□□□□ 0.38
SCML4Q8N228 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.45■□□□□ 0.38
SCML4Q8N228 AP006288.1-201ENST00000446065 395 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms