Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP1BQ7LBR1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 AC132938.5-201ENST00000624980 1813 ntBASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 LAGE3P1-201ENST00000425356 484 ntBASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 STK25P1-201ENST00000585406 838 ntBASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP1BQ7LBR1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AL022342.1-201ENST00000400363 863 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AC105339.3-201ENST00000560043 636 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AC004817.3-201ENST00000602957 2129 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 BX640515.1-201ENST00000617215 977 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AC073592.4-201ENST00000623827 446 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 AC107918.4-202ENST00000641623 219 ntBASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.66■□□□□ 0.1
CHMP1BQ7LBR1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms