Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.08■□□□□ 0.97
SMIM5Q71RC9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.08■□□□□ 0.97
SMIM5Q71RC9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM5Q71RC9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.08■□□□□ 0.97
SMIM5Q71RC9 KRT8P49-201ENST00000604166 1432 ntBASIC21.08■□□□□ 0.97
SMIM5Q71RC9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMIM5Q71RC9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.08■□□□□ 0.96
SMIM5Q71RC9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.08■□□□□ 0.96
SMIM5Q71RC9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 FAM220BP-201ENST00000377689 816 ntBASIC21.07■□□□□ 0.96
SMIM5Q71RC9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM5Q71RC9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 RNA5SP410-201ENST00000516285 106 ntBASIC21.06■□□□□ 0.96
SMIM5Q71RC9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM5Q71RC9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.05■□□□□ 0.96
SMIM5Q71RC9 MIR6775-201ENST00000617557 69 ntBASIC21.05■□□□□ 0.96
SMIM5Q71RC9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM5Q71RC9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms