Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 AC128676.1-201ENST00000454392 318 ntBASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 RN7SL471P-201ENST00000580476 299 ntBASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP4Q6PIL6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 CKBP1-201ENST00000565489 1086 ntBASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 AL445675.2-201ENST00000620291 557 ntBASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 AL135905.2-201ENST00000584934 1404 ntBASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
KCNIP4Q6PIL6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 ST20-AS1-201ENST00000560255 4223 ntBASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
KCNIP4Q6PIL6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms