Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AC010491.1-201ENST00000563101 2797 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 FSCN1P1-201ENST00000568912 1481 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 KRT18P29-201ENST00000397031 1267 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AL138781.1-201ENST00000566567 1274 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 AC008403.3-201ENST00000598924 454 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 AL009178.2-201ENST00000597278 2719 ntBASIC12.81□□□□□ -0.36
MRPL54Q6P161 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL54Q6P161 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ST20-AS1-201ENST00000560255 4223 ntBASIC12.8□□□□□ -0.36
MRPL54Q6P161 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 SERF2-207ENST00000409614 582 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AL353807.1-201ENST00000427475 662 ntBASIC12.8□□□□□ -0.36
MRPL54Q6P161 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 AC110285.5-201ENST00000611501 352 ntBASIC12.8□□□□□ -0.36
MRPL54Q6P161 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
MRPL54Q6P161 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
MRPL54Q6P161 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms