Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 LINC00895-201ENST00000629028 1637 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC005052.1-201ENST00000625181 2492 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 AL021920.2-201ENST00000624828 1351 ntBASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 KRT18P38-201ENST00000449496 1282 ntBASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 HOMER2P1-201ENST00000455653 964 ntBASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 NFIC-211ENST00000641145 8399 ntBASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00242Q5T6M2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
LINC00242Q5T6M2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
LINC00242Q5T6M2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AC011840.4-201ENST00000578471 627 ntBASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 AL592071.1-201ENST00000611956 408 ntBASIC11.58□□□□□ -0.56
LINC00242Q5T6M2 HYMAI.1-201ENST00000620949 238 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms