Protein–RNA interactions for Protein: P59894

DCDC1, Doublecortin domain-containing protein 1, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCDC1P59894 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.7■□□□□ 0.26
DCDC1P59894 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 AC140658.5-201ENST00000438532 169 ntBASIC16.7■□□□□ 0.26
DCDC1P59894 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.7■□□□□ 0.26
DCDC1P59894 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
DCDC1P59894 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DCDC1P59894 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.7■□□□□ 0.26
DCDC1P59894 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 RNU1-129P-201ENST00000384064 167 ntBASIC16.69■□□□□ 0.26
DCDC1P59894 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
DCDC1P59894 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 AC109635.5-201ENST00000533593 962 ntBASIC16.69■□□□□ 0.26
DCDC1P59894 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 U1.21-201ENST00000580816 167 ntBASIC16.69■□□□□ 0.26
DCDC1P59894 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.69■□□□□ 0.26
DCDC1P59894 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.69■□□□□ 0.26
DCDC1P59894 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DCDC1P59894 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DCDC1P59894 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
DCDC1P59894 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.68■□□□□ 0.26
DCDC1P59894 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.68■□□□□ 0.26
DCDC1P59894 YBX2P1-201ENST00000394192 760 ntBASIC16.68■□□□□ 0.26
DCDC1P59894 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 BX842568.4-201ENST00000421222 227 ntBASIC16.68■□□□□ 0.26
DCDC1P59894 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.68■□□□□ 0.26
DCDC1P59894 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 DNAJB3-201ENST00000446806 729 ntBASIC16.68■□□□□ 0.26
DCDC1P59894 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.68■□□□□ 0.26
DCDC1P59894 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
DCDC1P59894 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 MTDHP5-201ENST00000598980 586 ntBASIC16.68■□□□□ 0.26
DCDC1P59894 AL031055.1-201ENST00000606362 631 ntBASIC16.68■□□□□ 0.26
DCDC1P59894 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
DCDC1P59894 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DCDC1P59894 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.68■□□□□ 0.26
DCDC1P59894 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DCDC1P59894 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms