Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
PCP4P48539 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PCP4P48539 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 BNIP3P1-202ENST00000550043 1585 ntBASIC11.44□□□□□ -0.58
PCP4P48539 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.44□□□□□ -0.58
PCP4P48539 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PCP4P48539 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
PCP4P48539 AC008806.1-201ENST00000624962 2443 ntBASIC11.44□□□□□ -0.58
PCP4P48539 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.44□□□□□ -0.58
PCP4P48539 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PCP4P48539 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.43□□□□□ -0.58
PCP4P48539 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.43□□□□□ -0.58
PCP4P48539 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.43□□□□□ -0.58
PCP4P48539 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.43□□□□□ -0.58
PCP4P48539 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PCP4P48539 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PCP4P48539 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.43□□□□□ -0.58
PCP4P48539 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.43□□□□□ -0.58
PCP4P48539 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC11.43□□□□□ -0.58
PCP4P48539 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PCP4P48539 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PCP4P48539 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms