Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.78□□□□□ -0.04
GDNFP39905 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.78□□□□□ -0.04
GDNFP39905 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.78□□□□□ -0.04
GDNFP39905 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
GDNFP39905 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GDNFP39905 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.77□□□□□ -0.04
GDNFP39905 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.77□□□□□ -0.04
GDNFP39905 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
GDNFP39905 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
GDNFP39905 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.77□□□□□ -0.04
GDNFP39905 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GDNFP39905 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.77□□□□□ -0.04
GDNFP39905 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.77□□□□□ -0.05
GDNFP39905 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.77□□□□□ -0.05
GDNFP39905 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
GDNFP39905 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
GDNFP39905 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GDNFP39905 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
GDNFP39905 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.76□□□□□ -0.05
GDNFP39905 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 TSPY12P-201ENST00000421279 868 ntBASIC14.76□□□□□ -0.05
GDNFP39905 AC002558.1-201ENST00000488906 803 ntBASIC14.76□□□□□ -0.05
GDNFP39905 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
GDNFP39905 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.76□□□□□ -0.05
GDNFP39905 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.76□□□□□ -0.05
GDNFP39905 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
GDNFP39905 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 AC144831.1-201ENST00000573312 2656 ntBASIC14.76□□□□□ -0.05
GDNFP39905 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.76□□□□□ -0.05
GDNFP39905 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.76□□□□□ -0.05
GDNFP39905 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
GDNFP39905 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GDNFP39905 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
GDNFP39905 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
GDNFP39905 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms