Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
LAMA1P25391 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.32■□□□□ 0.2
LAMA1P25391 GNAQP1-201ENST00000444815 1067 ntBASIC16.32■□□□□ 0.2
LAMA1P25391 HLA-V-204ENST00000476601 1289 ntBASIC16.32■□□□□ 0.2
LAMA1P25391 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.32■□□□□ 0.2
LAMA1P25391 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.32■□□□□ 0.2
LAMA1P25391 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LAMA1P25391 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LAMA1P25391 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LAMA1P25391 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.32■□□□□ 0.2
LAMA1P25391 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LAMA1P25391 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LAMA1P25391 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LAMA1P25391 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
LAMA1P25391 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
LAMA1P25391 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 SPDYE19P-201ENST00000338590 713 ntBASIC16.31■□□□□ 0.2
LAMA1P25391 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.31■□□□□ 0.2
LAMA1P25391 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LAMA1P25391 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.31■□□□□ 0.2
LAMA1P25391 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.31■□□□□ 0.2
LAMA1P25391 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LAMA1P25391 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LAMA1P25391 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 AC004945.1-201ENST00000416738 983 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.3■□□□□ 0.2
LAMA1P25391 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
LAMA1P25391 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LAMA1P25391 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.3■□□□□ 0.2
LAMA1P25391 AC134043.2-201ENST00000624206 2238 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.3■□□□□ 0.2
LAMA1P25391 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.3■□□□□ 0.2
LAMA1P25391 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LAMA1P25391 AL589739.1-201ENST00000607720 493 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 LINC00895-201ENST00000629028 1637 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 AC093525.9-201ENST00000624961 1746 ntBASIC16.3■□□□□ 0.2
LAMA1P25391 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LAMA1P25391 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LAMA1P25391 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LAMA1P25391 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.3■□□□□ 0.2
LAMA1P25391 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LAMA1P25391 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.29■□□□□ 0.2
LAMA1P25391 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.29■□□□□ 0.2
LAMA1P25391 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 REXO1L6P-201ENST00000603433 1515 ntBASIC16.29■□□□□ 0.2
LAMA1P25391 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LAMA1P25391 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms