Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 AC129492.6-201ENST00000611383 1305 ntBASIC17.06■□□□□ 0.32
HLA-DPA1P20036 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 MRPL20P1-201ENST00000400819 433 ntBASIC17.06■□□□□ 0.32
HLA-DPA1P20036 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 AC013467.2-201ENST00000605472 835 ntBASIC17.06■□□□□ 0.32
HLA-DPA1P20036 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 AL645728.1-201ENST00000366221 2101 ntBASIC17.06■□□□□ 0.32
HLA-DPA1P20036 AGGF1P2-201ENST00000426656 2106 ntBASIC17.06■□□□□ 0.32
HLA-DPA1P20036 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DPA1P20036 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 AL391256.1-201ENST00000443260 1855 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 RNF216P1-203ENST00000404404 2427 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 AC098831.1-202ENST00000438821 336 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 AC108073.2-201ENST00000464002 357 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 AC091167.2-201ENST00000579581 588 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 AC116407.3-201ENST00000623905 1129 ntBASIC17.05■□□□□ 0.32
HLA-DPA1P20036 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DPA1P20036 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 HLA-A-201ENST00000376802 1334 ntBASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 FDX1P1-201ENST00000449115 551 ntBASIC17.04■□□□□ 0.32
HLA-DPA1P20036 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 AC107918.2-201ENST00000530817 355 ntBASIC17.04■□□□□ 0.32
HLA-DPA1P20036 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DPA1P20036 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms