Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
XRCC1P18887 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
XRCC1P18887 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
XRCC1P18887 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
XRCC1P18887 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.9■□□□□ 0.3
XRCC1P18887 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC1P18887 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC1P18887 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC1P18887 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.89■□□□□ 0.3
XRCC1P18887 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC1P18887 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
XRCC1P18887 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 AC046185.3-201ENST00000623228 1824 ntBASIC16.89■□□□□ 0.29
XRCC1P18887 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 GPR89P-201ENST00000407924 1495 ntBASIC16.89■□□□□ 0.29
XRCC1P18887 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.89■□□□□ 0.29
XRCC1P18887 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 AL353135.1-201ENST00000606729 504 ntBASIC16.89■□□□□ 0.29
XRCC1P18887 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.89■□□□□ 0.29
XRCC1P18887 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
XRCC1P18887 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
XRCC1P18887 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
XRCC1P18887 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.88■□□□□ 0.29
XRCC1P18887 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.88■□□□□ 0.29
XRCC1P18887 AC009947.1-201ENST00000444350 727 ntBASIC16.88■□□□□ 0.29
XRCC1P18887 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.88■□□□□ 0.29
XRCC1P18887 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.88■□□□□ 0.29
XRCC1P18887 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 AC116353.5-201ENST00000638148 1699 ntBASIC16.88■□□□□ 0.29
XRCC1P18887 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
XRCC1P18887 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.88■□□□□ 0.29
XRCC1P18887 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
XRCC1P18887 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms