Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC009336.1-201ENST00000608941 1553 ntBASIC14.88□□□□□ -0.03
ATF1P18846 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
ATF1P18846 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.88□□□□□ -0.03
ATF1P18846 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATF1P18846 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.87□□□□□ -0.03
ATF1P18846 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
ATF1P18846 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 AC003669.1-201ENST00000334569 611 ntBASIC14.87□□□□□ -0.03
ATF1P18846 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 CHCHD2P8-201ENST00000429873 447 ntBASIC14.87□□□□□ -0.03
ATF1P18846 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 AP002490.2-201ENST00000524791 560 ntBASIC14.87□□□□□ -0.03
ATF1P18846 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
ATF1P18846 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 AL121956.5-201ENST00000625261 221 ntBASIC14.87□□□□□ -0.03
ATF1P18846 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.87□□□□□ -0.03
ATF1P18846 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ATF1P18846 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 AL135999.2-201ENST00000622438 1686 ntBASIC14.87□□□□□ -0.03
ATF1P18846 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.87□□□□□ -0.03
ATF1P18846 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATF1P18846 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
ATF1P18846 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATF1P18846 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATF1P18846 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.86□□□□□ -0.03
ATF1P18846 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATF1P18846 AC091607.1-201ENST00000490318 1060 ntBASIC14.86□□□□□ -0.03
ATF1P18846 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.86□□□□□ -0.03
ATF1P18846 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.86□□□□□ -0.03
ATF1P18846 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms