Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RARBP10826 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARBP10826 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RARBP10826 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RARBP10826 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RARBP10826 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.83■□□□□ 0.6
RARBP10826 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RARBP10826 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.83■□□□□ 0.6
RARBP10826 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.83■□□□□ 0.6
RARBP10826 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.83■□□□□ 0.6
RARBP10826 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.83■□□□□ 0.6
RARBP10826 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.83■□□□□ 0.6
RARBP10826 AC004233.3-201ENST00000607794 1269 ntBASIC18.83■□□□□ 0.6
RARBP10826 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RARBP10826 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
RARBP10826 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.83■□□□□ 0.6
RARBP10826 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 AC131009.4-201ENST00000624048 1740 ntBASIC18.83■□□□□ 0.6
RARBP10826 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RARBP10826 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RARBP10826 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RARBP10826 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 EGFEM1P-202ENST00000431685 1563 ntBASIC18.82■□□□□ 0.6
RARBP10826 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.82■□□□□ 0.6
RARBP10826 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.82■□□□□ 0.6
RARBP10826 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.82■□□□□ 0.6
RARBP10826 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 AC105233.2-201ENST00000523697 349 ntBASIC18.82■□□□□ 0.6
RARBP10826 AF228730.5-201ENST00000530288 346 ntBASIC18.82■□□□□ 0.6
RARBP10826 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 AL596325.1-201ENST00000563991 1082 ntBASIC18.82■□□□□ 0.6
RARBP10826 RARRES2P9-201ENST00000565168 469 ntBASIC18.82■□□□□ 0.6
RARBP10826 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.82■□□□□ 0.6
RARBP10826 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 AC003101.2-201ENST00000612557 442 ntBASIC18.82■□□□□ 0.6
RARBP10826 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.82■□□□□ 0.6
RARBP10826 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RARBP10826 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.82■□□□□ 0.6
RARBP10826 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RARBP10826 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.81■□□□□ 0.6
RARBP10826 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RARBP10826 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 AC022144.1-201ENST00000602255 1580 ntBASIC18.81■□□□□ 0.6
RARBP10826 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RARBP10826 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RARBP10826 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 OR8S1-201ENST00000310194 1080 ntBASIC18.81■□□□□ 0.6
RARBP10826 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RARBP10826 TSSK5P-201ENST00000423978 907 ntBASIC18.81■□□□□ 0.6
RARBP10826 AC142381.1-201ENST00000426099 345 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms