Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CAPN1P07384 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.69■□□□□ 0.26
CAPN1P07384 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CAPN1P07384 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 RPS2P28-201ENST00000314255 741 ntBASIC16.69■□□□□ 0.26
CAPN1P07384 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 RPL13AP23-201ENST00000480739 586 ntBASIC16.69■□□□□ 0.26
CAPN1P07384 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 IGHV3-22-201ENST00000520721 359 ntBASIC16.69■□□□□ 0.26
CAPN1P07384 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.69■□□□□ 0.26
CAPN1P07384 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.69■□□□□ 0.26
CAPN1P07384 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CAPN1P07384 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
CAPN1P07384 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 AC078925.2-201ENST00000624013 1973 ntBASIC16.68■□□□□ 0.26
CAPN1P07384 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN1P07384 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN1P07384 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 OR7E14P-202ENST00000530490 1290 ntBASIC16.68■□□□□ 0.26
CAPN1P07384 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.68■□□□□ 0.26
CAPN1P07384 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 MTDHP4-201ENST00000600287 670 ntBASIC16.68■□□□□ 0.26
CAPN1P07384 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CAPN1P07384 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CAPN1P07384 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CAPN1P07384 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
CAPN1P07384 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CAPN1P07384 AC079776.2-201ENST00000641154 1609 ntBASIC16.67■□□□□ 0.26
CAPN1P07384 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CAPN1P07384 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CAPN1P07384 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPN1P07384 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.67■□□□□ 0.26
CAPN1P07384 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.67■□□□□ 0.26
CAPN1P07384 AC073592.4-201ENST00000623827 446 ntBASIC16.67■□□□□ 0.26
CAPN1P07384 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CAPN1P07384 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CAPN1P07384 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.67■□□□□ 0.26
CAPN1P07384 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CAPN1P07384 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.67■□□□□ 0.26
CAPN1P07384 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CAPN1P07384 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CAPN1P07384 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 FRMD8P1-201ENST00000440433 1524 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CAPN1P07384 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms