Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
POLR3DP05423 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR3DP05423 AC092902.6-201ENST00000641783 218 ntBASIC20.17■□□□□ 0.82
POLR3DP05423 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.17■□□□□ 0.82
POLR3DP05423 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
POLR3DP05423 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
POLR3DP05423 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
POLR3DP05423 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
POLR3DP05423 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
POLR3DP05423 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR3DP05423 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR3DP05423 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
POLR3DP05423 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
POLR3DP05423 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
POLR3DP05423 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.16■□□□□ 0.82
POLR3DP05423 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
POLR3DP05423 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 AC005412.3-201ENST00000580309 715 ntBASIC20.16■□□□□ 0.82
POLR3DP05423 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR3DP05423 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR3DP05423 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
POLR3DP05423 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 AC099398.1-201ENST00000567919 2776 ntBASIC20.16■□□□□ 0.82
POLR3DP05423 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR3DP05423 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 CNN2P11-201ENST00000429351 262 ntBASIC20.15■□□□□ 0.82
POLR3DP05423 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.15■□□□□ 0.82
POLR3DP05423 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
POLR3DP05423 AC112191.1-201ENST00000523689 701 ntBASIC20.15■□□□□ 0.82
POLR3DP05423 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR3DP05423 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
POLR3DP05423 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR3DP05423 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
POLR3DP05423 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR3DP05423 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
POLR3DP05423 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
POLR3DP05423 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
POLR3DP05423 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
POLR3DP05423 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
POLR3DP05423 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
POLR3DP05423 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
POLR3DP05423 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR3DP05423 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR3DP05423 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR3DP05423 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.14■□□□□ 0.81
POLR3DP05423 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
POLR3DP05423 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.14■□□□□ 0.81
POLR3DP05423 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR3DP05423 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms