Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
IFNA1P01562 LINC02228-204ENST00000642115 2962 ntBASIC13.42□□□□□ -0.26
IFNA1P01562 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 ME2P1-201ENST00000426028 1970 ntBASIC13.42□□□□□ -0.26
IFNA1P01562 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 DGCR10-201ENST00000609839 495 ntBASIC13.42□□□□□ -0.26
IFNA1P01562 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.42□□□□□ -0.26
IFNA1P01562 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.42□□□□□ -0.26
IFNA1P01562 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFNA1P01562 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
IFNA1P01562 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IFNA1P01562 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.41□□□□□ -0.26
IFNA1P01562 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.41□□□□□ -0.26
IFNA1P01562 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 CROCCP5-201ENST00000436658 830 ntBASIC13.41□□□□□ -0.26
IFNA1P01562 UNC93B5-201ENST00000530315 699 ntBASIC13.41□□□□□ -0.26
IFNA1P01562 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.41□□□□□ -0.26
IFNA1P01562 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFNA1P01562 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.41□□□□□ -0.26
IFNA1P01562 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.41□□□□□ -0.26
IFNA1P01562 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFNA1P01562 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.4□□□□□ -0.26
IFNA1P01562 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms