Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 AC106795.1-205ENST00000512851 1056 ntBASIC15.63■□□□□ 0.09
LGI1O95970 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.63■□□□□ 0.09
LGI1O95970 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.63■□□□□ 0.09
LGI1O95970 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.63■□□□□ 0.09
LGI1O95970 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LGI1O95970 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LGI1O95970 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.63■□□□□ 0.09
LGI1O95970 AC079328.2-201ENST00000561241 3354 ntBASIC15.62■□□□□ 0.09
LGI1O95970 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.62■□□□□ 0.09
LGI1O95970 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 NCF1C-201ENST00000438382 1427 ntBASIC15.62■□□□□ 0.09
LGI1O95970 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.62■□□□□ 0.09
LGI1O95970 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.62■□□□□ 0.09
LGI1O95970 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.62■□□□□ 0.09
LGI1O95970 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.62■□□□□ 0.09
LGI1O95970 AC064862.7-201ENST00000604520 867 ntBASIC15.62■□□□□ 0.09
LGI1O95970 AC013467.2-201ENST00000605472 835 ntBASIC15.62■□□□□ 0.09
LGI1O95970 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.62■□□□□ 0.09
LGI1O95970 AL139011.1-202ENST00000642063 584 ntBASIC15.62■□□□□ 0.09
LGI1O95970 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
LGI1O95970 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.62■□□□□ 0.09
LGI1O95970 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.62■□□□□ 0.09
LGI1O95970 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
LGI1O95970 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LGI1O95970 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.62■□□□□ 0.09
LGI1O95970 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LGI1O95970 AC006277.1-201ENST00000624348 1610 ntBASIC15.61■□□□□ 0.09
LGI1O95970 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
LGI1O95970 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.61■□□□□ 0.09
LGI1O95970 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LGI1O95970 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.61■□□□□ 0.09
LGI1O95970 ALOX12P2-203ENST00000570921 1945 ntBASIC15.61■□□□□ 0.09
LGI1O95970 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.61■□□□□ 0.09
LGI1O95970 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 BX005266.1-201ENST00000473402 457 ntBASIC15.61■□□□□ 0.09
LGI1O95970 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LGI1O95970 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.61■□□□□ 0.09
LGI1O95970 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms