Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 AC010460.3-201ENST00000511359 1579 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 UNC93B2-201ENST00000285383 730 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 RBM17P1-201ENST00000453646 1190 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 AC107956.1-201ENST00000494359 873 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 IGHV3-52-201ENST00000519770 353 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 AP003071.4-201ENST00000562276 1284 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 AC010653.2-201ENST00000623505 997 ntBASIC12.4□□□□□ -0.42
SMKR1H3BMG3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SMKR1H3BMG3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 KRT89P-201ENST00000620027 1478 ntBASIC12.4□□□□□ -0.43
SMKR1H3BMG3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.4□□□□□ -0.43
SMKR1H3BMG3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 MTHFR-217ENST00000641820 1569 ntBASIC12.39□□□□□ -0.43
SMKR1H3BMG3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 AC010491.1-201ENST00000563101 2797 ntBASIC12.39□□□□□ -0.43
SMKR1H3BMG3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.39□□□□□ -0.43
SMKR1H3BMG3 MYCLP1-201ENST00000372451 1075 ntBASIC12.39□□□□□ -0.43
SMKR1H3BMG3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms