Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC004790.2-201ENST00000623588 572 ntBASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 PKD1P1-201ENST00000458669 6805 ntBASIC19.88■□□□□ 0.77
PTPDC1A2A3K4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 PTCHD3P3-201ENST00000403073 906 ntBASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 UPF3AP3-201ENST00000420996 769 ntBASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AC002347.1-201ENST00000569543 541 ntBASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 AL645728.1-201ENST00000366221 2101 ntBASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPDC1A2A3K4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 TUBB8P12-201ENST00000308911 1335 ntBASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 TUBB7P-202ENST00000428444 1305 ntBASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 TUBB8P7-204ENST00000567960 1332 ntBASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 GPX1P2-201ENST00000429271 606 ntBASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 AL805961.1-202ENST00000641562 540 ntBASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PTPDC1A2A3K4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 RPSAP43-201ENST00000402237 625 ntBASIC19.85■□□□□ 0.77
PTPDC1A2A3K4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms