Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PCDHB11Q9Y5F2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 AC108073.2-201ENST00000464002 357 ntBASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 GGTLC5P-201ENST00000617623 998 ntBASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 AL805961.1-202ENST00000641562 540 ntBASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB11Q9Y5F2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PCDHB11Q9Y5F2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 YBX1P5-201ENST00000509441 847 ntBASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 LINC02012-201ENST00000608206 1725 ntBASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB11Q9Y5F2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AC124067.4-201ENST00000519691 2379 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AP002414.1-201ENST00000391405 1147 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 MRPL20P1-201ENST00000400819 433 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 PTCHD3P3-201ENST00000403073 906 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 HTR5BP-201ENST00000430851 1154 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 MKNK2P1-201ENST00000437526 628 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 AC010654.1-201ENST00000615722 808 ntBASIC16.57■□□□□ 0.24
PCDHB11Q9Y5F2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms