Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMCC3Q9ULS5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AL513523.2-202ENST00000427283 2040 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TSPY26P-202ENST00000565928 3884 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TSPY22P-201ENST00000427496 604 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 RN7SL606P-201ENST00000472779 293 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AC090616.6-201ENST00000582640 721 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AL592071.1-201ENST00000611956 408 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PCDHA1-201ENST00000378133 2726 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AL662844.4-201ENST00000606367 2838 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 PCDHB17P-201ENST00000539533 2393 ntBASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.75■□□□□ 0.11
TMCC3Q9ULS5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 KRT18P57-201ENST00000443599 1254 ntBASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 KRT18P21-201ENST00000515767 1272 ntBASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 AL353801.3-201ENST00000609898 542 ntBASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 LINC02199-201ENST00000506655 2702 ntBASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 AL596257.1-201ENST00000641463 2694 ntBASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMCC3Q9ULS5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms