Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 Z92544.3-201ENST00000624747 417 ntBASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIT1Q9P2V4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 UXT-AS1-201ENST00000590504 1525 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 WASH6P-202ENST00000359512 1437 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 PMS2P4-201ENST00000412466 1052 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 FAM8A3P-201ENST00000427218 844 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 MPDU1-223ENST00000582151 728 ntBASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIT1Q9P2V4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 KRT8P49-201ENST00000604166 1432 ntBASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AC067863.1-201ENST00000494933 530 ntBASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 KRT8P23-201ENST00000560090 1207 ntBASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 PP12613-201ENST00000424958 2230 ntBASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIT1Q9P2V4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms