Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AC104819.1-201ENST00000504587 486 ntBASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
TRIM56Q9BRZ2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC092364.2-201ENST00000596710 2692 ntBASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC092329.2-201ENST00000598402 547 ntBASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC138894.3-201ENST00000603787 634 ntBASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 AC093458.2-201ENST00000623150 629 ntBASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM56Q9BRZ2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM56Q9BRZ2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms