Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CMSS1Q9BQ75 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 AC073508.3-201ENST00000619697 1419 ntBASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.52□□□□□ -0.08
CMSS1Q9BQ75 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 AC005521.1-201ENST00000393351 872 ntBASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.52□□□□□ -0.09
CMSS1Q9BQ75 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 STK19B-204ENST00000512515 211 ntBASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 AC011840.4-201ENST00000578471 627 ntBASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 AL138831.2-201ENST00000606564 490 ntBASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 AC097493.4-201ENST00000641197 219 ntBASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.51□□□□□ -0.09
CMSS1Q9BQ75 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms