Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC026691.1-201ENST00000602502 2017 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 TSPY26P-202ENST00000565928 3884 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.88□□□□□ -0.35
VGLL1Q99990 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC011498.5-201ENST00000592027 486 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
VGLL1Q99990 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC092364.2-201ENST00000596710 2692 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.88□□□□□ -0.35
VGLL1Q99990 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 AC132938.5-201ENST00000624980 1813 ntBASIC12.88□□□□□ -0.35
VGLL1Q99990 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VGLL1Q99990 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
VGLL1Q99990 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 KLF4P1-201ENST00000412782 1185 ntBASIC12.87□□□□□ -0.35
VGLL1Q99990 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.87□□□□□ -0.35
VGLL1Q99990 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 LINC01238-205ENST00000567549 1107 ntBASIC12.87□□□□□ -0.35
VGLL1Q99990 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 HYMAI-201ENST00000635591 3347 ntBASIC12.87□□□□□ -0.35
VGLL1Q99990 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms