Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 AC016396.2-201ENST00000562575 1417 ntBASIC12.87□□□□□ -0.35
AP1S3Q96PC3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
AP1S3Q96PC3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 C2orf69P3-201ENST00000565542 1120 ntBASIC12.86□□□□□ -0.35
AP1S3Q96PC3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AL049637.2-201ENST00000641778 930 ntBASIC12.86□□□□□ -0.35
AP1S3Q96PC3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 LINC02228-204ENST00000642115 2962 ntBASIC12.86□□□□□ -0.35
AP1S3Q96PC3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 REXO1L11P-201ENST00000620964 1927 ntBASIC12.86□□□□□ -0.35
AP1S3Q96PC3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP1S3Q96PC3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 FAM201B-201ENST00000458407 597 ntBASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SEC1P-202ENST00000473944 940 ntBASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 AC010653.2-201ENST00000623505 997 ntBASIC12.85□□□□□ -0.35
AP1S3Q96PC3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms