Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 LAGE3P1-201ENST00000425356 484 ntBASIC17.9■□□□□ 0.46
TRIM11Q96F44 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM11Q96F44 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM11Q96F44 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM11Q96F44 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.89■□□□□ 0.45
TRIM11Q96F44 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 AL805961.1-202ENST00000641562 540 ntBASIC17.89■□□□□ 0.45
TRIM11Q96F44 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM11Q96F44 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM11Q96F44 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 AC092171.3-201ENST00000610122 2651 ntBASIC17.88■□□□□ 0.45
TRIM11Q96F44 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 AKR1C7P-201ENST00000305623 895 ntBASIC17.88■□□□□ 0.45
TRIM11Q96F44 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 AC025062.2-201ENST00000605477 670 ntBASIC17.88■□□□□ 0.45
TRIM11Q96F44 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM11Q96F44 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.88■□□□□ 0.45
TRIM11Q96F44 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM11Q96F44 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 PTCHD3P3-201ENST00000403073 906 ntBASIC17.87■□□□□ 0.45
TRIM11Q96F44 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 AC087163.2-201ENST00000457299 853 ntBASIC17.87■□□□□ 0.45
TRIM11Q96F44 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM11Q96F44 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms