Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 AC124067.4-201ENST00000519691 2379 ntBASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF3IP1Q8TDR0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 AC079328.2-201ENST00000561241 3354 ntBASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 AL589182.2-201ENST00000619332 1049 ntBASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 AL590787.1-201ENST00000568856 1315 ntBASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 AC243591.1-201ENST00000452967 1364 ntBASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
TRAF3IP1Q8TDR0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF3IP1Q8TDR0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF3IP1Q8TDR0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 AL118508.1-201ENST00000613502 2345 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 AP002414.1-201ENST00000391405 1147 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 FGFR3P6-201ENST00000457012 610 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 AC139887.3-201ENST00000568585 713 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 AL139424.1-201ENST00000607572 797 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 REXO1L6P-202ENST00000619970 1078 ntBASIC17.64■□□□□ 0.41
TRAF3IP1Q8TDR0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms