Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 PMS2P1-201ENST00000431037 1228 ntBASIC17.9■□□□□ 0.46
UBA3Q8TBC4 FAM185BP-201ENST00000443595 716 ntBASIC17.9■□□□□ 0.46
UBA3Q8TBC4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 CXCL1P1-201ENST00000502804 216 ntBASIC17.9■□□□□ 0.46
UBA3Q8TBC4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 AC018845.2-201ENST00000568326 409 ntBASIC17.9■□□□□ 0.46
UBA3Q8TBC4 ACTL9-202ENST00000612068 1252 ntBASIC17.9■□□□□ 0.46
UBA3Q8TBC4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
UBA3Q8TBC4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBA3Q8TBC4 NKILA-202ENST00000614771 2598 ntBASIC17.89■□□□□ 0.46
UBA3Q8TBC4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.89■□□□□ 0.46
UBA3Q8TBC4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBA3Q8TBC4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AC009053.2-201ENST00000563701 2365 ntBASIC17.89■□□□□ 0.45
UBA3Q8TBC4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 MIR574-201ENST00000385209 96 ntBASIC17.89■□□□□ 0.45
UBA3Q8TBC4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 AC011676.5-201ENST00000624864 2660 ntBASIC17.89■□□□□ 0.45
UBA3Q8TBC4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBA3Q8TBC4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 AC078925.2-201ENST00000624013 1973 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 SLC22A20-204ENST00000530038 1673 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 MPDU1-223ENST00000582151 728 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.88■□□□□ 0.45
UBA3Q8TBC4 AL671883.3-201ENST00000603274 991 ntBASIC17.88■□□□□ 0.45
UBA3Q8TBC4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms