Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTL3Q8N8U3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTL3Q8N8U3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL3Q8N8U3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTL3Q8N8U3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.33■□□□□ 0.37
RTL3Q8N8U3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 MIR574-201ENST00000385209 96 ntBASIC17.33■□□□□ 0.36
RTL3Q8N8U3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 HCG4-201ENST00000418983 998 ntBASIC17.33■□□□□ 0.36
RTL3Q8N8U3 KRT18P3-201ENST00000451602 1288 ntBASIC17.33■□□□□ 0.36
RTL3Q8N8U3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.33■□□□□ 0.36
RTL3Q8N8U3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTL3Q8N8U3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 RNA5SP416-201ENST00000516838 111 ntBASIC17.32■□□□□ 0.36
RTL3Q8N8U3 KRT18P58-201ENST00000527480 1120 ntBASIC17.32■□□□□ 0.36
RTL3Q8N8U3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTL3Q8N8U3 AC078925.2-201ENST00000624013 1973 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 RNF216P1-203ENST00000404404 2427 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 PCDHA12-202ENST00000613593 2588 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AL513480.1-201ENST00000451731 511 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AC018845.2-201ENST00000568326 409 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AL671883.3-201ENST00000603274 991 ntBASIC17.31■□□□□ 0.36
RTL3Q8N8U3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RTL3Q8N8U3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTL3Q8N8U3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL3Q8N8U3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTL3Q8N8U3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms