Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 FGFR3P6-201ENST00000457012 610 ntBASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 AL139424.1-201ENST00000607572 797 ntBASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 LINC02228-204ENST00000642115 2962 ntBASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.54■□□□□ 0.08
LSMEM1Q8N8F7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 PRELID1P1-202ENST00000567272 903 ntBASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 LINC00895-201ENST00000629028 1637 ntBASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.53■□□□□ 0.08
LSMEM1Q8N8F7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 KRT8P49-201ENST00000604166 1432 ntBASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LSMEM1Q8N8F7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms