Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATPAF2Q8N5M1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 REXO1L3P-201ENST00000622202 1288 ntBASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
ATPAF2Q8N5M1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 AC078925.2-201ENST00000624013 1973 ntBASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.33■□□□□ 0.37
ATPAF2Q8N5M1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 FDX1P1-201ENST00000449115 551 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 UNC93B6-202ENST00000528242 690 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 AC010654.1-201ENST00000615722 808 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 AC004790.2-201ENST00000623588 572 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 RNF216P1-203ENST00000404404 2427 ntBASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATPAF2Q8N5M1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 AC129492.6-201ENST00000611383 1305 ntBASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ATPAF2Q8N5M1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms