Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 BX276092.7-203ENST00000637198 1536 ntBASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 PPT1-215ENST00000641471 2368 ntBASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CROCCP3Q8IVE0 HLA-A-202ENST00000376806 1854 ntBASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC026396.1-201ENST00000419388 421 ntBASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC026366.1-201ENST00000488803 879 ntBASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC124947.2-201ENST00000547118 1133 ntBASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AL359183.1-201ENST00000623796 2132 ntBASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CROCCP3Q8IVE0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.36■□□□□ 0.05
CROCCP3Q8IVE0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms