Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM1Q86UE6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 RNF152P1-201ENST00000397754 604 ntBASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AL137013.1-201ENST00000432946 1228 ntBASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM1Q86UE6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 AC011840.4-201ENST00000578471 627 ntBASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 AC073592.5-201ENST00000624854 528 ntBASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRTM1Q86UE6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms