Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 FRMD8P1-201ENST00000440433 1524 ntBASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAI1Q7Z5J4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC012313.1-201ENST00000593393 3059 ntBASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC005225.4-201ENST00000557330 545 ntBASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 LINC02560-201ENST00000596379 459 ntBASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC100757.3-201ENST00000622361 1406 ntBASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.31□□□□□ -0.12
RAI1Q7Z5J4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 AP001094.4-201ENST00000579008 2176 ntBASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.3□□□□□ -0.12
RAI1Q7Z5J4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms