Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC104640.1-201ENST00000562617 2109 ntBASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC112698.1-201ENST00000510299 916 ntBASIC15.68■□□□□ 0.1
TUBA1AQ71U36 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC074051.2-201ENST00000565115 352 ntBASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.68■□□□□ 0.1
TUBA1AQ71U36 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA1AQ71U36 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 RNF216P1-203ENST00000404404 2427 ntBASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBA1AQ71U36 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 AL365203.3-201ENST00000609742 2057 ntBASIC15.66■□□□□ 0.1
TUBA1AQ71U36 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA1AQ71U36 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms