Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HIST2H3AQ71DI3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 AC107918.4-202ENST00000641623 219 ntBASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 KRT8P49-201ENST00000604166 1432 ntBASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 CICP6-201ENST00000457191 2729 ntBASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST2H3AQ71DI3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 LINC00895-201ENST00000629028 1637 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AL645728.1-201ENST00000366221 2101 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 LAGE3P1-201ENST00000425356 484 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AF228730.7-201ENST00000641842 219 ntBASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST2H3AQ71DI3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms