Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP1Q04837 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SSBP1Q04837 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP1Q04837 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SSBP1Q04837 AC063926.3-201ENST00000624734 5658 ntBASIC14.36□□□□□ -0.11
SSBP1Q04837 GGT3P-204ENST00000453783 1664 ntBASIC14.36□□□□□ -0.11
SSBP1Q04837 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP1Q04837 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP1Q04837 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SSBP1Q04837 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 AC023824.1-201ENST00000562945 2975 ntBASIC14.35□□□□□ -0.11
SSBP1Q04837 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 AC003669.1-201ENST00000334569 611 ntBASIC14.35□□□□□ -0.11
SSBP1Q04837 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.35□□□□□ -0.11
SSBP1Q04837 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.35□□□□□ -0.11
SSBP1Q04837 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SSBP1Q04837 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSBP1Q04837 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 AC006449.6-201ENST00000612330 2296 ntBASIC14.35□□□□□ -0.11
SSBP1Q04837 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
SSBP1Q04837 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSBP1Q04837 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SSBP1Q04837 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSBP1Q04837 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 FAM220CP-201ENST00000395253 831 ntBASIC14.34□□□□□ -0.11
SSBP1Q04837 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 ZNF444P1-201ENST00000559497 298 ntBASIC14.34□□□□□ -0.11
SSBP1Q04837 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.34□□□□□ -0.11
SSBP1Q04837 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 AC073912.3-201ENST00000624414 853 ntBASIC14.34□□□□□ -0.11
SSBP1Q04837 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSBP1Q04837 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP1Q04837 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP1Q04837 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP1Q04837 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms