Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNRPEP62304 PRTG-204ENST00000561292 833 ntTSL 3 BASIC12.96□□□□□ -0.33
SNRPEP62304 NTF6A-201ENST00000591175 560 ntBASIC12.96□□□□□ -0.33
SNRPEP62304 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC12.96□□□□□ -0.33
SNRPEP62304 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNRPEP62304 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.96□□□□□ -0.33
SNRPEP62304 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNRPEP62304 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNRPEP62304 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNRPEP62304 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SNRPEP62304 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SNRPEP62304 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.96□□□□□ -0.34
SNRPEP62304 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SNRPEP62304 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.96□□□□□ -0.34
SNRPEP62304 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNRPEP62304 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
SNRPEP62304 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.95□□□□□ -0.34
SNRPEP62304 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.95□□□□□ -0.34
SNRPEP62304 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SNRPEP62304 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.95□□□□□ -0.34
SNRPEP62304 TCAF1P1-201ENST00000414990 2232 ntBASIC12.95□□□□□ -0.34
SNRPEP62304 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.95□□□□□ -0.34
SNRPEP62304 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.95□□□□□ -0.34
SNRPEP62304 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC12.95□□□□□ -0.34
SNRPEP62304 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
SNRPEP62304 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SNRPEP62304 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNRPEP62304 AL671710.1-201ENST00000610245 2349 ntBASIC12.95□□□□□ -0.34
SNRPEP62304 KRT8P3-201ENST00000519669 1449 ntBASIC12.95□□□□□ -0.34
SNRPEP62304 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNRPEP62304 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SNRPEP62304 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
SNRPEP62304 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.94□□□□□ -0.34
SNRPEP62304 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.94□□□□□ -0.34
SNRPEP62304 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC12.94□□□□□ -0.34
SNRPEP62304 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SNRPEP62304 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SNRPEP62304 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.94□□□□□ -0.34
SNRPEP62304 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNRPEP62304 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.94□□□□□ -0.34
SNRPEP62304 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms