Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP11P51784 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.05■□□□□ 0.64
USP11P51784 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP11P51784 RNU1-129P-201ENST00000384064 167 ntBASIC19.05■□□□□ 0.64
USP11P51784 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.05■□□□□ 0.64
USP11P51784 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
USP11P51784 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.05■□□□□ 0.64
USP11P51784 U1.21-201ENST00000580816 167 ntBASIC19.05■□□□□ 0.64
USP11P51784 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
USP11P51784 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
USP11P51784 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 AC099398.1-201ENST00000567919 2776 ntBASIC19.05■□□□□ 0.64
USP11P51784 KRT8P39-201ENST00000396270 1433 ntBASIC19.05■□□□□ 0.64
USP11P51784 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
USP11P51784 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.05■□□□□ 0.64
USP11P51784 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP11P51784 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP11P51784 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 AC109635.5-201ENST00000533593 962 ntBASIC19.04■□□□□ 0.64
USP11P51784 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.04■□□□□ 0.64
USP11P51784 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
USP11P51784 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP11P51784 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP11P51784 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
USP11P51784 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 AC092919.2-201ENST00000623631 1645 ntBASIC19.03■□□□□ 0.64
USP11P51784 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.03■□□□□ 0.64
USP11P51784 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.03■□□□□ 0.64
USP11P51784 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.03■□□□□ 0.64
USP11P51784 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP11P51784 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 UPF3AP3-201ENST00000420996 769 ntBASIC19.03■□□□□ 0.64
USP11P51784 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.03■□□□□ 0.64
USP11P51784 AC092474.2-201ENST00000424288 719 ntBASIC19.03■□□□□ 0.64
USP11P51784 MKNK2P1-201ENST00000437526 628 ntBASIC19.03■□□□□ 0.64
USP11P51784 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.03■□□□□ 0.64
USP11P51784 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.03■□□□□ 0.64
USP11P51784 AC112482.1-201ENST00000492080 688 ntBASIC19.03■□□□□ 0.64
USP11P51784 AL009183.1-201ENST00000603760 355 ntBASIC19.03■□□□□ 0.64
USP11P51784 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
USP11P51784 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP11P51784 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.03■□□□□ 0.64
USP11P51784 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.03■□□□□ 0.64
USP11P51784 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP11P51784 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
USP11P51784 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.02■□□□□ 0.64
USP11P51784 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
USP11P51784 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.02■□□□□ 0.64
USP11P51784 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
USP11P51784 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP11P51784 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms