Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC004706.3-202ENST00000621574 984 ntBASIC17.71■□□□□ 0.43
SLC1A1P43005 AF228730.7-201ENST00000641842 219 ntBASIC17.71■□□□□ 0.43
SLC1A1P43005 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 ME2P1-201ENST00000426028 1970 ntBASIC17.71■□□□□ 0.43
SLC1A1P43005 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A1P43005 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A1P43005 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A1P43005 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.71■□□□□ 0.42
SLC1A1P43005 AC026691.1-201ENST00000602502 2017 ntBASIC17.71■□□□□ 0.42
SLC1A1P43005 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC1A1P43005 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A1P43005 UPK3BP1-201ENST00000428678 509 ntBASIC17.7■□□□□ 0.42
SLC1A1P43005 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A1P43005 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A1P43005 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC1A1P43005 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A1P43005 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A1P43005 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A1P43005 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A1P43005 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A1P43005 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A1P43005 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A1P43005 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 ALOX12P2-203ENST00000570921 1945 ntBASIC17.69■□□□□ 0.42
SLC1A1P43005 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 TSPY19P-201ENST00000418461 509 ntBASIC17.69■□□□□ 0.42
SLC1A1P43005 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A1P43005 TSPY18P-201ENST00000441642 509 ntBASIC17.69■□□□□ 0.42
SLC1A1P43005 FGFR3P6-201ENST00000457012 610 ntBASIC17.69■□□□□ 0.42
SLC1A1P43005 SCARNA2-201ENST00000458748 420 ntBASIC17.69■□□□□ 0.42
SLC1A1P43005 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A1P43005 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A1P43005 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A1P43005 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A1P43005 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A1P43005 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A1P43005 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A1P43005 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms