Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RPA3P35244 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.15■□□□□ 0.34
RPA3P35244 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.15■□□□□ 0.34
RPA3P35244 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RPA3P35244 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RPA3P35244 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RPA3P35244 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
RPA3P35244 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.14■□□□□ 0.33
RPA3P35244 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.14■□□□□ 0.33
RPA3P35244 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.14■□□□□ 0.33
RPA3P35244 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
RPA3P35244 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPA3P35244 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.14■□□□□ 0.33
RPA3P35244 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RPA3P35244 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.13■□□□□ 0.33
RPA3P35244 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.13■□□□□ 0.33
RPA3P35244 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.13■□□□□ 0.33
RPA3P35244 AC138894.3-201ENST00000603787 634 ntBASIC17.13■□□□□ 0.33
RPA3P35244 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.13■□□□□ 0.33
RPA3P35244 AL049757.1-201ENST00000616842 1596 ntBASIC17.13■□□□□ 0.33
RPA3P35244 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 AC103702.1-201ENST00000548801 2630 ntBASIC17.13■□□□□ 0.33
RPA3P35244 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
RPA3P35244 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPA3P35244 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.12■□□□□ 0.33
RPA3P35244 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 TP73-AS1-210ENST00000637775 1455 ntBASIC17.12■□□□□ 0.33
RPA3P35244 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPA3P35244 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPA3P35244 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.12■□□□□ 0.33
RPA3P35244 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms