Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM4SF1P30408 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM4SF1P30408 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 AC011495.1-201ENST00000498085 584 ntBASIC20.77■□□□□ 0.92
TM4SF1P30408 AC093004.1-201ENST00000508850 424 ntBASIC20.77■□□□□ 0.92
TM4SF1P30408 AC044860.1-202ENST00000559481 777 ntBASIC20.77■□□□□ 0.92
TM4SF1P30408 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.77■□□□□ 0.92
TM4SF1P30408 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TM4SF1P30408 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.77■□□□□ 0.92
TM4SF1P30408 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.77■□□□□ 0.91
TM4SF1P30408 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TM4SF1P30408 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM4SF1P30408 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TM4SF1P30408 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TM4SF1P30408 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TM4SF1P30408 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 SLC7A15P-201ENST00000424028 1363 ntBASIC20.76■□□□□ 0.91
TM4SF1P30408 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TM4SF1P30408 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
TM4SF1P30408 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.76■□□□□ 0.91
TM4SF1P30408 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TM4SF1P30408 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.76■□□□□ 0.91
TM4SF1P30408 AC114501.2-201ENST00000439631 535 ntBASIC20.76■□□□□ 0.91
TM4SF1P30408 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.76■□□□□ 0.91
TM4SF1P30408 AC022210.1-201ENST00000449856 793 ntBASIC20.76■□□□□ 0.91
TM4SF1P30408 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.76■□□□□ 0.91
TM4SF1P30408 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.76■□□□□ 0.91
TM4SF1P30408 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.76■□□□□ 0.91
TM4SF1P30408 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.76■□□□□ 0.91
TM4SF1P30408 MIR6805-201ENST00000615055 62 ntBASIC20.76■□□□□ 0.91
TM4SF1P30408 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
TM4SF1P30408 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.76■□□□□ 0.91
TM4SF1P30408 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TM4SF1P30408 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF1P30408 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TM4SF1P30408 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 MIR658-201ENST00000385210 100 ntBASIC20.75■□□□□ 0.91
TM4SF1P30408 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.75■□□□□ 0.91
TM4SF1P30408 RNA5SP410-201ENST00000516285 106 ntBASIC20.75■□□□□ 0.91
TM4SF1P30408 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.75■□□□□ 0.91
TM4SF1P30408 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.75■□□□□ 0.91
TM4SF1P30408 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.75■□□□□ 0.91
TM4SF1P30408 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.75■□□□□ 0.91
TM4SF1P30408 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TM4SF1P30408 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TM4SF1P30408 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF1P30408 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.74■□□□□ 0.91
TM4SF1P30408 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.74■□□□□ 0.91
TM4SF1P30408 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.74■□□□□ 0.91
TM4SF1P30408 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TM4SF1P30408 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms