Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.53■□□□□ 0.4
CD48P09326 KRT18P67-201ENST00000432816 1264 ntBASIC17.53■□□□□ 0.4
CD48P09326 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.53■□□□□ 0.4
CD48P09326 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.53■□□□□ 0.4
CD48P09326 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.53■□□□□ 0.4
CD48P09326 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.53■□□□□ 0.4
CD48P09326 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.53■□□□□ 0.4
CD48P09326 AC104692.2-201ENST00000603054 253 ntBASIC17.53■□□□□ 0.4
CD48P09326 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.53■□□□□ 0.4
CD48P09326 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 AC006277.1-201ENST00000624348 1610 ntBASIC17.53■□□□□ 0.4
CD48P09326 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.53■□□□□ 0.4
CD48P09326 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.53■□□□□ 0.4
CD48P09326 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.53■□□□□ 0.4
CD48P09326 AC092364.2-201ENST00000596710 2692 ntBASIC17.53■□□□□ 0.4
CD48P09326 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD48P09326 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.4
CD48P09326 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.52■□□□□ 0.4
CD48P09326 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 AL049840.3-201ENST00000602669 611 ntBASIC17.52■□□□□ 0.4
CD48P09326 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 AC008735.5-201ENST00000623544 497 ntBASIC17.52■□□□□ 0.4
CD48P09326 AF228730.7-201ENST00000641842 219 ntBASIC17.52■□□□□ 0.4
CD48P09326 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD48P09326 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.52■□□□□ 0.4
CD48P09326 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CD48P09326 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.52■□□□□ 0.39
CD48P09326 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD48P09326 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.52■□□□□ 0.39
CD48P09326 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD48P09326 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD48P09326 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD48P09326 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.52■□□□□ 0.39
CD48P09326 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.52■□□□□ 0.39
CD48P09326 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CD48P09326 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.51■□□□□ 0.39
CD48P09326 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.51■□□□□ 0.39
CD48P09326 SNX33P1-201ENST00000592116 1762 ntBASIC17.51■□□□□ 0.39
CD48P09326 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.51■□□□□ 0.39
CD48P09326 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.51■□□□□ 0.39
CD48P09326 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.51■□□□□ 0.39
CD48P09326 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.51■□□□□ 0.39
CD48P09326 AC136632.2-201ENST00000512891 861 ntBASIC17.51■□□□□ 0.39
CD48P09326 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.51■□□□□ 0.39
CD48P09326 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CD48P09326 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.51■□□□□ 0.39
CD48P09326 AC005052.1-201ENST00000625181 2492 ntBASIC17.51■□□□□ 0.39
CD48P09326 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
CD48P09326 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD48P09326 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD48P09326 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms