Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
CSF1RP07333 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CSF1RP07333 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CSF1RP07333 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CSF1RP07333 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.63■□□□□ 0.89
CSF1RP07333 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.63■□□□□ 0.89
CSF1RP07333 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.63■□□□□ 0.89
CSF1RP07333 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CSF1RP07333 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.63■□□□□ 0.89
CSF1RP07333 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CSF1RP07333 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.63■□□□□ 0.89
CSF1RP07333 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.63■□□□□ 0.89
CSF1RP07333 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.63■□□□□ 0.89
CSF1RP07333 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 AP3S2-216ENST00000617003 1561 ntBASIC20.63■□□□□ 0.89
CSF1RP07333 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 PCDHB18P-201ENST00000524813 2368 ntBASIC20.63■□□□□ 0.89
CSF1RP07333 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSF1RP07333 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.62■□□□□ 0.89
CSF1RP07333 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.62■□□□□ 0.89
CSF1RP07333 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CSF1RP07333 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.62■□□□□ 0.89
CSF1RP07333 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.62■□□□□ 0.89
CSF1RP07333 FAM8A3P-201ENST00000427218 844 ntBASIC20.62■□□□□ 0.89
CSF1RP07333 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.62■□□□□ 0.89
CSF1RP07333 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.62■□□□□ 0.89
CSF1RP07333 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.62■□□□□ 0.89
CSF1RP07333 AC140878.1-201ENST00000565277 250 ntBASIC20.62■□□□□ 0.89
CSF1RP07333 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 AC011467.4-201ENST00000594891 528 ntBASIC20.62■□□□□ 0.89
CSF1RP07333 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.62■□□□□ 0.89
CSF1RP07333 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CSF1RP07333 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSF1RP07333 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CSF1RP07333 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSF1RP07333 AC073439.1-201ENST00000624121 1774 ntBASIC20.62■□□□□ 0.89
CSF1RP07333 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CSF1RP07333 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.61■□□□□ 0.89
CSF1RP07333 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSF1RP07333 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.61■□□□□ 0.89
CSF1RP07333 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.61■□□□□ 0.89
CSF1RP07333 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.61■□□□□ 0.89
CSF1RP07333 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
CSF1RP07333 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 AP002490.2-201ENST00000524791 560 ntBASIC20.61■□□□□ 0.89
CSF1RP07333 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.61■□□□□ 0.89
CSF1RP07333 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.61■□□□□ 0.89
CSF1RP07333 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.61■□□□□ 0.89
CSF1RP07333 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.61■□□□□ 0.89
CSF1RP07333 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.61■□□□□ 0.89
CSF1RP07333 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.61■□□□□ 0.89
CSF1RP07333 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSF1RP07333 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.6■□□□□ 0.89
CSF1RP07333 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.6■□□□□ 0.89
CSF1RP07333 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSF1RP07333 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSF1RP07333 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CSF1RP07333 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms